Penta D

Other Names Chromosomal Location GenBank Accession

UniSTS: none reported

21q22.3

Chr 21; 43.880 Mb (May 2004, NCBI Build 35)

AP001752; has 13 repeats

Repeat: [AAAGA] = top strand  

Reported Primers Ref. PCR Primer Sequences
Set 1 Promega

PowerPlex 16 (JOE labeled) primer sequences

5'-[JOE]-GAAGGTCGAAGCTGAAGTG-3'

5'-ATTAGAATTCTTTAATCTGGACACAAG-3'

PCR Product Sizes of Observed Alleles  

Allele (Repeat #) Set 1 Repeat Structure Ref.
1.1 370 bp   variant allele
1.2 371 bp   variant allele
2.2 376 bp   GenePrint® PowerPlex™ 16 System Technical Manual
3.2 381 bp   GenePrint® PowerPlex™ 16 System Technical Manual
4 384 bp   variant allele
5 389 bp [AAAGA]5 GenePrint® PowerPlex™ 16 System Technical Manual
6 394 bp   variant allele
6.4 398 bp   variant allele
7 399 bp [AAAGA]7 GenePrint® PowerPlex™ 16 System Technical Manual
7.1 400 bp   variant allele
7.4 403 bp   variant allele
8 404 bp [AAAGA]8 GenePrint® PowerPlex™ 16 System Technical Manual
8.1 405 bp   variant allele
9 409 bp [AAAGA]9 GenePrint® PowerPlex™ 16 System Technical Manual
9.1 410 bp   variant allele
9.4 413 bp   variant allele
10 414 bp [AAAGA]10 GenePrint® PowerPlex™ 16 System Technical Manual
10.1 415 bp   variant allele
10.2 416 bp   variant allele
10.3 417 bp   variant allele
11 419 bp [AAAGA]11 GenePrint® PowerPlex™ 16 System Technical Manual
11.1 420 bp   variant allele
11.2 421 bp   variant allele
12 424 bp [AAAGA]12 GenePrint® PowerPlex™ 16 System Technical Manual
12.1 425 bp   variant allele
12.2 426 bp   variant allele
12.3 427 bp   variant allele
12.4 428 bp   variant allele
13 429 bp [AAAGA]13 GenePrint® PowerPlex™ 16 System Technical Manual
13.2 431 bp   variant allele
13.3 432 bp   variant allele
13.4 433 bp   variant allele
14 434 bp [AAAGA]14 GenePrint® PowerPlex™ 16 System Technical Manual
14.1 435 bp   variant allele
14.4 438 bp   variant allele
15 439 bp [AAAGA]15 GenePrint® PowerPlex™ 16 System Technical Manual
15.1 440 bp   variant allele
16  444 bp [AAAGA]16 GenePrint® PowerPlex™ 16 System Technical Manual
17 449 bp [AAAGA]17  GenePrint® PowerPlex™ 16 System Technical Manual
18 454 bp   variant allele

Allelic Ladders: Commercially available from Promega (ladder allele range: 2.2-17)

Common Multiplexes: PowerPlex 16

Mutation Rate: 0.14%

 

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Last Updated: 07/10/2007