CSF1PO Variants
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Allele Designation |
Allele Size |
Instrument |
Amp Kit* |
Contributor |
Verification/Conformation Method(s) |
Notes |
Frequency |
5 |
277.50 |
ABI 377 |
CO |
Re-extracted and reamplifed |
|
|
|
5 [2] |
277.50 |
ALFExpress II Amersham-Pharmacia |
CV |
Ricardo Lleonart Yamila Carpio |
Sequenced |
Center for Genetic Engineering and Biotechnology |
1 in 400 |
5 (<6) |
313.02 |
ABI 310 |
PS.CO |
Jackie Johnson MO State Highway Patrol |
Re-extract and Re-amplify |
Convicted Offender |
1 in 32660 |
6.3 |
307.32 |
ABI 3130XL |
ID |
Arnaud Gleizes & Laurent Pene, Laboratoire de Police |
Re-amplified and re-analyzed |
|
1 in 11500 |
7.3 |
286.82 |
ABI 310 |
CO |
Re-extracted and re-amplified |
|
|
|
7.3 [2] |
299.76 |
ABI 310 |
PP 1.2 |
Greg Sykes ATCC |
Re-extracted and re-amplified |
B lymphocyte; Epstein-Barr virus (EBV) transformed, ATCC cell line CRL-8756; name: SC-1 |
|
7.3 [3] |
288.11 |
ABI 377 |
CO |
Craig O'Connor/Linda Strausbaugh,
|
Re-amplified and reanalyzed |
Anonymous samples collected for Connecticut Database |
1 in 600 |
7.3 [4] |
311.20 +/- 0.13 |
ABI 3130XL |
ID |
Arnaud Gleizes & Laurent Pene, Laboratoire de Police |
Re-amplified and re-analyzed |
|
2 in 11500 |
7.3 [5] |
266.78±0.09 |
ABI 3100 |
CO |
Jan Nicklas,VT Forensic Laboratory |
Re-amp |
|
2 in 3750 |
8.3 |
328.09 |
ABI 310 |
PP 16 |
Jackie Johnson MO State Highway Patrol |
Re-extract and Re-amplify |
Convicted Offender |
1 in 32660 |
9.1 |
294.21 |
ABI 377 |
CO |
|
Re-amplified |
Convicted offender known |
1 |
9.1 [2] |
293.11 |
ABI 310 |
co |
Christine Moraczewski NE State Patrol Crime Lab |
Re-extracted & Re-amplify |
|
1 |
9.1 [3] |
330.40 |
ABI 310 |
PP 16 |
Jackie Johnson MO State Highway Patrol |
Re-extract and Re-amplify |
Convicted Offender |
1 in 32660 |
9.3 |
332.66 |
ABI 3100 |
PP |
Cory |
Re-amplified |
Conficted Offender Sample |
1 at time of submission |
10.1 |
297.96 |
ABI 377 |
CO |
|
Reamplified |
Convicted offender known |
1 |
10.1 [2] |
296.94 |
ABI 310 |
CO |
Lonnie Ginsberg
|
Observed in known and question sample |
|
|
10.2 |
297.85 |
ABI 310 |
CO |
Brian Koeneman Arizona DPS |
Re-extracted |
Convicted offender known |
|
10.2 [2] |
298.86 |
ABI 377 |
PS |
Catherine Allor |
Reamplified and Reanalyzed |
Paternity samples only |
1 in 33300 |
10.2 [3] | 334.96 | ABI 3100 | PP 16 | Laura Kuyper M U F S C | Amplified x 2 | BC 7365 | 2 |
10.3 |
298.75 |
ABI 310 |
CO |
MO State Highway Patrol |
Re-extracted and Re-amplified |
Convicted offender |
1 in 2575 to date |
10.3 [2] |
310.58 |
ABI 310 |
PP 1.2 |
Greg Sykes ATCC |
Re-extracted and Re-amplified |
From Hodgkin's lymphoma cell line, ATCC cell line HTB-146; name: Hs 445 |
|
10.3 [3] |
337.89 |
ABI 3100 |
PP |
Ronny Decorte, Lab for Forensic
Genetics & Molecular Archeology, |
Re-extracted and Re-amplified with PR |
Suspect, Caucasian |
l in 3249 (mainly Caucasians) |
10.3 [4] |
324.25 |
ABI 3100 |
ID |
Angela Withrow M U F S C |
Re-amplified x 1 |
Alabama Department of Forensic Sciences Convicted Offender Sample |
4 in 13945 |
10.3 [5] |
323.41 |
ABI 3130XL |
ID |
Arnaud Gleizes & Laurent Pene, Laboratoire de Police |
Re-amplified and re-analyzed |
|
1 in 11500 |
10.3 [6] | 324.64 | ABI 310 | ID | Johnson_E USACIL | Re-extracted and re-amplified | Reference Blood | |
11.1 |
300.72 |
ABI 310 |
CO |
Sharon Polakowski, |
Re-extraction and Re-amplification |
casework |
1 in 3000 |
11.3 |
340.37 |
ABI 310 |
PP 16 |
Jackie Johnson MO
|
Re-extract and Re-amplify |
Convicted Offender |
|
11.3 [2] |
303.79 |
ABI 3100 |
CO |
Jan Nicklas, VT Forensic Laboratory` |
Re-amp |
|
|
12.1 |
304.87 |
ABI 310 |
PR |
Re-extracted and re-amplifed |
Sample sent to Perkin Elmer for sequencing |
3 in 200 Navajo samples |
|
12.1 [2] |
342.49 |
ABI 310 |
PP 16 |
Malena B. Jimenez, MO State Highway Patrol |
Re-extracted and re-amplify |
Convicted Offender |
1 in 69600 |
16 |
321.53 |
ABI 310 |
Perkin Elmer Green |
Sequenced |
Published: |
|
|
16[2] |
321.58 |
ABI 310 |
PR |
K. Duffy/R. Rubocki |
Re-amplification |
present in father and his son Published: |
2 |
16 [3] |
320.64 |
ABI 377 |
PS |
Catherine Allor |
Reamplified and Reanalyzed |
Paternity samples only |
1 in 33300 |
16 [4] |
321.76±0.06 |
ABI 3100 |
CO |
Jan Nicklas, VT Forensic Laboratory |
Re-amp |
|
3 in 3750 |
16 ( >15) |
320.49 |
ABI 3100 |
PS & CO |
Amgela Withrow M U F S C |
Re-extraction |
|
1 in 9960 |
16 (>15) [2] |
357.53 |
ABI 310 |
PP 16 |
Jackie Johnson MO State Highway Patrol |
Re-extract and Re-amplify |
Convicted Offender |
1 in 32660 |
16 reported variants as of 2/24/2006
Tri-Allelic Patterns
Allele Designation |
Instrument |
Amp Kit* |
Contributor |
Verification/Conformation Method(s) |
Notes |
Frequency |
8, 12, 13 |
FMBIO II |
PP1.1 |
Kamala Glenn, Sandra Walters, Justin Lewis; |
Re-extracted (x2) & re-amped (x3) |
Paternity sample (duplicated) |
6 |
9, 11, 12 |
ABI 377 |
CO |
Kelly Solis Texas DPS |
Re-extracted |
Convicted offender |
1 in 68,000 |
10, 11, 12 |
ABI 377 |
CO |
Kelly Solis Texas DPS |
Re-extracted |
Convicted offender |
1 in 39,000 |
10, 11, 12 [2] |
ABI 3100 |
ID |
Angela Withrow M U F S C |
Re-amp x 1 |
AL Convicted Offender sample |
1 in 16334 |
10, 11, 12 [3] |
ABI 310 |
PP 16 |
Malena B. Jimenez, MO State Highway Patrol |
Re-extract and Re-amplify |
Convicted Offender |
1 in 69600 |
10, 12, 13 | ABI 3100 | PP 16 & ID | Laura Kuyper M U F S C |
Amplification x 2 for PP 16 Amplification x 1 for ID |
BC7289 | |
11, 12, 13 |
ABI 3100 |
ID |
Angela Withrow M U F S C |
Re-amp x 1 |
Alabama Convicted Offender sample |
2 in 15763 |
11, 12, 13 [2] |
Abi 310 |
Co |
Jan Nicklas, VT Forensic Laboratory |
Re-amp |
11=12+13 |
|
5 reported tri-allelic patterns as of 4/13/2007
* Use the following abbreviations for amplification kit names:
§ CO: PE Applied Biosystems COfilerTM
§ PR: PE Applied Biosystems ProfilerTM
§ PS: PE Applied Biosystems Profiler PlusTM
§ CV: Promega CTTVTM
§ CA: Promega CTTATM
§ PP: Promega PowerPlexTM
§ MP: Promega MonoPlexTM
§ ID: PE Applied Biosystems IdentifilerTM
- Other: Please specify