D8S1179

Other Names
Chromosomal Location
GenBank Accession

D6S502

UniSTS: 83408

8q24.13

Chr 8; 125.976 Mb (May 2004, NCBI build 35)

G08710; has 12 repeat units
AF216671; has 13 repeat units

Repeat: [TATC] = GenBank top strand (called [TCTA] by FSS {375})
 

Reported Primers Ref. PCR Primer Sequences
Set 1

369

5' - TTTTTGTATTTCATGTGTACATTCG - 3'

5' - CGTAGCTATAATTAGTTCATTTTCA - 3'

Set 2

PE ABI
 Profiler Plus (JOE labeled), SGM Plus (JOE labeled), Identifiler (6-FAM labeled)

Set 3

Promega

PowerPlex 2.1 (TMR labeled), PowerPlex 16 (TMR labeled) primer sequences

5'-ATTGCAACTTATATGTATTTTTGTATTTCATG-3'

5'-[TMR]-ACCAAATTGTGTTCATGAGTATAGTTTC-3'

PCR Product Sizes of Observed Alleles
 

Allele

(Repeat #)

Set 1

Set 2

Set 3

Repeat Structure

Ref.
7 157 bp 123 bp 203 bp [TCTA]7 716
8 161 bp 127 bp 207 bp [TCTA]8 369
9 165 bp  131 bp 211 bp [TCTA]9 369
10 169 bp 135 bp 215 bp [TCTA]10 369
10.2 171 bp 137 bp 217 bp   variant allele
11 173 bp 139 bp 219 bp [TCTA]11 369
12 177 bp 143 bp 223 bp [TCTA]12 369
12.3 180 bp 146 bp 226 bp   variant allele
13 181 bp 147 bp 227 bp [TCTA]1[TCTG]1[TCTA]11 369
14 185 bp 151 bp 231 bp [TCTA]1[TCTG]1[TCTA]12 369
15 189 bp 155 bp 235 bp [TCTA]1[TCTG]1[TCTA]13 369
15.1 190 bp 156 bp 236 bp   variant allele
15.3 192 bp 158 bp 238 bp   variant allele
16 193 bp 159 bp 239 bp [TCTA]2[TCTG]1[TCTA]13 369
17 197 bp 163 bp 243 bp [TCTA]2[TCTG]2[TCTA]13 369
17.1 198 bp 164 bp 244 bp   variant allele
18 201 bp 167 bp 247 bp [TCTA]2[TCTG]1[TCTA]15 369
19 205 bp 171 bp 251 bp [TCTA]2[TCTG]2[TCTA]15 716
20 209 bp 175 bp 255 bp   variant allele

Allelic Ladders: Commercially available from Promega and Applied Biosystems

Common Multiplexes: PowerPlex 2.1, PowerPlex 16, Profiler Plus, SGM Plus, Identifiler

Mutation Rate: 0.14%

 

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Last Updated: 12/31/2009