D7S820


Other Names
Chromosomal Location
GenBank Accession

D7

UniSTS: 74895

7q21.11

Chr 7; 83.433 Mb (May 2004, NCBI build 35)

G08616; has 12 repeat units
AC004848
; has 13 repeat units

Repeat: [GATA] = GenBank top strand
 

Reported Primers Ref. PCR Primer Sequences

Set 1

Promega

PowerPlex 1.1 (FL labeled), PowerPlex 16 (JOE labeled) primer sequences

5'-[JOE]-ATGTTGGTCAGGCTGACTATG-3'

5'-GATTCCACATTTATCCTCATTGAC-3'

Set 2

ABI

Profiler Plus (NED labeled), COfiler (NED labeled), Identifiler (6-FAM labeled)

Set 3

453

5'-TGTCATAGTTTAGAACGAACTAACG-3'

5'-CTGAGGTATCAAAAACTCAGAGG-3' 

PCR Product Sizes of Observed Alleles
 

Allele       (Repeat #)
Set 1
Set 2

Set 3

Repeat Structure
Ref.
5 211 bp 253 bp 194 bp  

variant allele

5.2         variant allele
6 215 bp 257 bp 198 bp [GATA]6 721
6.2         variant allele
6.3 218 bp 260 bp 201 bp   variant allele
7 219 bp  261 bp 202 bp  [GATA]7 721
7.1         variant allele
7.3 222 bp 264 bp 205 bp  

variant allele

8 223 bp 265 bp 206 bp [GATA]8 721
8.1 224 bp 266 bp 207 bp  

variant allele

8.2 225 bp 267 bp 208 bp  

variant allele  

8.3         variant allele
9 227 bp 269 bp 210 bp [GATA]9 721
9.1 228 bp 270 bp 211 bp  

variant allele

9.2         variant allele
9.3 230 bp 272 bp 213 bp  

variant allele  

10 231 bp 273 bp 214 bp [GATA]10 721
10.1 232 bp 274 bp 215 bp  

variant allele

10.3 234 bp 276 bp 217 bp  

variant allele  

11 235 bp 277 bp 218 bp [GATA]11 721
11.1 236 bp 278 bp 219 bp  

variant allele

11.3         variant allele
12 239 bp 281 bp 222 bp [GATA]12 721
12.1 240 bp 282 bp 223 bp  

variant allele  

12.2         variant allele
12.3         variant allele
13 243 bp 285 bp 226 bp [GATA]13 721
13.1 244 bp 286 bp 227 bp  

variant allele

14 247 bp 289 bp 230 bp [GATA]14 721
14.1         variant allele
15 251 bp 293 bp 234 bp  

Profiler Plus

16         variant allele

Allelic Ladders: Commercially available from Promega and Applied Biosystems

Common Multiplexes: PowerPlex 1.1, PowerPlex 16, Profiler Plus, COfiler, Identifiler

Mutation Rate: 0.10%

 

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Last Updated: 06/28/2007