FES/FPS

Other Names
Chromosomal Location
GenBank Accession
FES
15q25-qter; human c-fes/fps proto-oncogene
X06292; has 11 repeats

Repeat: [AAAT] = bottom strand (commonly used); [ATTT] = GenBank top strand
 

Reported Primers Ref. PCR Primer Sequences
Set 1
4

5'-GGGATTTCCCTATGGATTGG-3' (ATTT strand) 

5'-GCGAAAGAATGAGACTACAT-3' (TAAA strand)
Set 2
126

5'-GGAAGATGGAGTGGCTGTTA-3' (ATTT strand)

5'-CTCCAGCCTGGCGAAAGAAT-3' (TAAA strand)
Set 3
3

5'-GCTTGTTAATTCATGTAGGGAAGGC-3' (ATTT strand)

5'-GTAGTCCCAGCTACTTGGCTACTC-3' (TAAA strand)

*recent sequence information has shown that some DNA templates may not contain the T that is four nucleotides from the 5'-end in the forward primer

PCR Product Sizes of Observed Alleles
 

Allele 

(Repeat #)
Set 1
Set 2
Set 3
Repeat Structure
Ref.
7 207 bp 138 bp 222 bp [ATTT]7 138
7a* 207 bp 138 bp 222 bp [ATTT]7 138
8 211 bp 142 bp 226 bp [ATTT]8 5
9 215 bp 146 bp 230 bp [ATTT]9 5
10 219 bp 150 bp 234 bp [ATTT]10 5
10a* 219 bp 150 bp 234 bp [ATTT]10 34
11 223 bp 154 bp 238 bp [ATTT]11 5
11a* 223 bp 154 bp 238 bp [ATTT]11 34
12 227 bp 158 bp 242 bp [ATTT]12 5
12a* 227 bp 158 bp 242 bp [ATTT]12 391
13 231 bp 162 bp 246 bp [ATTT]13 5
13a* 231 bp 162 bp 246 bp [ATTT]13 381
14 235 bp 166 bp 250 bp [ATTT]14 5
15 239 bp 170 bp 252 bp [ATTT]15 138

*microvariants; an A to C transversion at base 34 of the 5' flanking sequence when compared to the regular allele

Allelic Ladders: Commercially available from Promega

Common Multiplexes: FFFL; British Quadruplex

Original Paper

FES/FPS Population Studies

FES/FPS Reference List

 

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Last Updated: 04/17/2013