PCR Primers for Amplifying STR Markers


Caskey/Promega/Other Primers

*NOTE*: Published primers are not necessarily those used by commerical sources.

STR Locus

Chromosomal Position

GenBank Accession

Primer Sequence (5'-->3')

Reference

ACTBP2 (SE33)

6

V00481

(HSAC04)

5'-AATCTGGGCGACAAGAGTGA-3'

5'-ACATCTCCCCTACCGCTATA-3'

6

Amelogenin

Xp22.1-.3 Yp11.2

M55418

M55419

5'-ACCTCATCCTGGGCACCCTGG-3'

5'-AGGCTTGAGGCCAACCATCAG-3'

96

APOA2

11q23-qter

J00048

5'-GTGACAGAGGGAGACTCCATTAAA-3'

5'-GGAGCAGTCCTAGGGCCGCGCCGT-3'

6

APOB

2p24-p23

J04838

5'-ACATTGATTCCTTGGAGTTTCTCTA-3'

5'-GGGCAAAAGAGCGAGACTCCATCTC-3'

6

ARA

Xcen-q13

M21748

5'-TCCAGAATCTGTTCCAGAGCGTGC-3'

5'-GCTGTGAAGGTTGCTGTTCCTCAT-3'

2,3

CD4

12p12-pter

M86525

5'-TTGGAGTCGCAAGCTGAACTAGCG-3'

5'-CCAGGAAGTTGAGGCTGCAGTGAA-3'

3

CRYGBC

2q33-q35

M19364

5'-CCGACAGAGTGAGACTCCATCTCA-3'

5'-ACAGGATCCTATCTTCTCAGGAGG-3'

6

CSF1PO

5q33.3-q34

X14720

5'-AACCTGAGTCTGCCAAGGACTAGC-3'

5'-TTCCACACACCACTGGCCATCTTC-3'

3

CYAR04 (P450)

15q21.1

M30798

5'-GGTAAGCAGGTACTTAGTTAGCTAC-3'

5'-GTTACAGTGAGCCAAGGTCGTGAG-3'

3

D21S11

21q11-q21

M84567

5'-GTGAGTCAATTCCCCAAG-3'

5'-GTTGTATTAGTCAATGTTCTCC-3'

2,6

D6S366

6q21-qter

L25870

5'-AGAGGTTACAGTGAGCCGAGATTG-3'

5'-GAAGTCCTAACAGAATGGAAGGTCC-3'

3

D7S460

7

 

5'-AATACCCCAAGGGGTGGTAA-3'

5'-CATTGATGAACAGTTCAAGCA-3'

6

DYS19

Y

X77751

5'-CTACTGAGTTTCTGTTATAGT-3'

5'-ATGGCATGTAGTGAGGACA-3'

95

F13A1

6p24-25

M21986

5'-GAGGTTGCACTCGAGCCTTTGCAA-3'

5'-TTCCTGAATCATCCCAGAGCCACA-3'

3

F13B

1q31-q32.1

M64554

5'-TGAGGTGGTGTACTACCATA-3'

5'-GATCATGCCATTGCACTCTA-3'

149

FABP

4q28-q31

M18079

5'-GTAGTATCAGTTTCATAGGGTCACC-3'

5'-CAGTTCGTTTCCATTGTCTGTCCG-3'

3,6

FES/FPS

15q25-qter

X06292

5'-GCTTGTTAATTCATGTAGGGAAGGC-3'

5'-GTAGTCCCAGCTACTTGGCTACTC-3'

3

FIBRA (FGA)

4q28

M64982

5'-ATTATCCAAAAGTCAAATGCCCCATAGG-3'

5'-ATCGAAAATATGGTTATTGAAGTAGCTG-3'

6

HPRTB

Xq26

M26434

5'-ATGCCACAGATAATACACATCCCC-3'

5'-CTCTCCAGAATAGTTAGATGTAGG-3'

2,3

LIPOL (LPL)

8p22

M15856

5'-CTGACCAAGGATAGTGGGATATAG-3'

5'-GGTAACTGAGCGAGACTGTGTCT-3'

3

MBP

18q23-pter

M63599

5'-GGACCTCGTGAATTACAATC-3'

5'-ATTTACCTACCTGTTCATCC-3'

89

PLA2A1

12q23-qter

M22970

5'-GGTTGTAAGCTCCATGAGGTTAGA-3'

5'-TTGAGCACTTACTATGTGCCAGGCT-3'

3

RENA4

1q32

M10151

5'-AGAGTACCTTCCCTCCTCTACTCA-3'

5'-CTCTATGGAGCTGGTAGAACCTGA-3'

3

TFIIDA

 

M34960

(mRNA)

5'-CAATGATGCCTTATGGCACTGGAC-3'

5'-TGTGAGAGTCTGTGAGTGGAAGAG-3'

6

TH01

11p15-15.5

D00269

5'-GTGGGCTGAAAAGCTCCCGATTAT-3'

5'-ATTCAAAGGGTATCTGGGCTCTGG-3'

2,3

TPOX

2p23-2pter

M68651

5'-ACTGGCACAGAACAGGCACTTAGG-3'

5'-GGAGGAACTGGGAACCACACAGGT-3'

153

VWA

12p12-pter

M25858

5'-CCCTAGTGGATGATAAGAATAATC-3'

5'-GGACAGATGATAAATACATAGGATGGATGG-3'

4

 

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